Regulatory elements

• ORegAnno : Open REGulatory ANNOtation database: an open database for the curation of known regulatory elements from scientific literature.


• FlyTF : systematic review of site-specific transcription factors in the fruit fly Drosophila melanogaster.


• DBD : Transcription factor prediction database


• TFdb : Riken Transcription Factor Database


• TRANSFAC : database on eukaryotic transcription factors, their genomic binding sites and DNA-binding profiles.


• FlyReg : Drosophila DNase I Footprint Database


• TRRD : Transcription Regulatory Regions Database


• MpromDB : Mammalian Promoter Database


• EPD : The Eukaryotic Promoter Database


• SCPD : Promoter Database of Saccharomyces cerevisiae


• PlantCARE : Database of plant cis-acting regulatory elements


• HemoDB : Database of genes that relate to vertebrate red blood cells, including information related to transcription factor binding sites.


• OPD : Osteo-Promoter Database


• dbQSNP : This database accumulates and presents experimental data of sequences and allele frequencies of SNPs in the promoter regions.

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